Submit Motif Enrichment Job

CENTDIST is a novel web-application for identifying co-localized transcription factors around ChIP-seq peaks. Unlike traditional motif scanning program, CENTDIST does not require any user-specific parameters and the background. It automatically learns the best set of parameters for different motifs and ranks them based on the skewness of their distribution around ChIP-seq peaks.

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Sample Output(AR_LNCAP)
Try our De Novo Motif Finding Tool for ChIP-seq (SEME)

Try an example Choose Example

Input Title Title:
Upload peak coordinates
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Motif
TRANSFAC, JASPAR and CUSTOM MOTIF
Default Database selection Transfac
Jaspar
Taxonomy selection Vertebrate
Plant
Insect
Bacteria
Fungi
Others
Check/Uncheck All
Show Custom motif database and Motif grouping
Settings Max comotif distance(1000 means histogram is +/- 1000bp)
Settings Scanning false positive
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We welcome you to join our discussion group at http://groups.google.com/group/centdist-discuss